Assay name
HS_BEST1_1677728 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for BEST1
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
BEST1
Gene aliases
BMD;BEST;RP50;VMD2
Species
Homo sapiens
Main target
ENST00000524926
Exons numbers
4-5
Ensembl exons ids
ENSE00003565169;ENSE00003502325
Amplicon start
532
Amplicon length
65
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000378043
Protein coding
CCDS31580
NM_001300787;NM_001300786;NM_004183
Chr.11: 61950351 - 61964461
ENST00000449131
Protein coding
CCDS44623
NM_001139443
Chr.11: 61950370 - 61965515
ENST00000524877
Retained intron
Chr.11: 61950360 - 61964294
ENST00000524926
Nonsense mediated decay
CCDS86208
Chr.11: 61950360 - 61964461
ENST00000526988
Protein coding
Chr.11: 61955157 - 61962371
ENST00000529265
Retained intron
Chr.11: 61950353 - 61958929
ENST00000533521
Retained intron
Chr.11: 61950356 - 61956866
ENST00000652345
Protein coding
CCDS86208
Chr.11: 61951807 - 61962259