Assay name
HS_COPS3_1684259 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for COPS3
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
COPS3
Gene aliases
SGN3;CSN3
Species
Homo sapiens
Main target
ENST00000539941
Exons numbers
3-5
Ensembl exons ids
ENSE00003458989;ENSE00003635224;ENSE00003519143
Amplicon start
425
Amplicon length
103
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000268717
Protein coding
CCDS11183
NM_003653;NM_001316355
Chr.17: 17246616 - 17281246
ENST00000417352
Protein coding
Chr.17: 17260374 - 17281239
ENST00000439936
Protein coding
Chr.17: 17246874 - 17280700
ENST00000462236
Retained intron
Chr.17: 17264934 - 17281160
ENST00000477299
Nonsense mediated decay
Chr.17: 17262020 - 17281246
ENST00000486810
Retained intron
Chr.17: 17260302 - 17276066
ENST00000492672
Nonsense mediated decay
Chr.17: 17261998 - 17281246
ENST00000539941
Protein coding
CCDS56022
NM_001316358;NM_001316356;NM_001316357;NM_001316354;NM_001199125
Chr.17: 17246820 - 17280777
ENST00000577210
Nonsense mediated decay
Chr.17: 17260305 - 17281186
ENST00000577246
Nonsense mediated decay
Chr.17: 17262046 - 17281273
ENST00000578317
Nonsense mediated decay
Chr.17: 17246837 - 17281191
ENST00000583160
Protein coding
Chr.17: 17261966 - 17270976
ENST00000584216
Nonsense mediated decay
Chr.17: 17260398 - 17281273