Assay name
HS_DDX39B_1708504 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for DDX39B
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
DDX39B
Species
Homo sapiens
Main target
ENST00000444267
Exons numbers
4-5
Ensembl exons ids
ENSE00003478892;ENSE00003529056
Amplicon start
581
Amplicon length
121
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000417136
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31527372 - 31532478
ENST00000428291
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31527358 - 31532738
ENST00000430784
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31520968 - 31533197
ENST00000431360
Protein coding
NM_080598
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31520968 - 31533197
ENST00000436995
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31526144 - 31532233
ENST00000439927
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31523529 - 31532280
ENST00000444267
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31526156 - 31532686
ENST00000444726
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31526137 - 31532767
ENST00000450987
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31520968 - 31531285
ENST00000489688
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31520968 - 31532766
ENST00000496801
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31523162 - 31532750