Assay name​
HS_SLC6A1_1745540 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SLC6A1
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
SLC6A1
Gene aliases​
GAT1;GABATR;GABATHG
Species​
Homo sapiens
Main target​
ENST00000645029
Exons numbers​
14-15
Ensembl exons ids​
ENSE00003473555;ENSE00003830567
Amplicon start​
2066
Amplicon length​
89
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000287766
Protein coding
CCDS2603
NM_003042
Chr.3: 10992748 - 11039247
ENST00000495636
Retained intron
Chr.3: 11032191 - 11039169
ENST00000642201
Protein coding
CCDS2603
Chr.3: 10992801 - 11039186
ENST00000642515
Protein coding
CCDS2603
Chr.3: 10992748 - 11038482
ENST00000642639
Protein coding
CCDS2603
Chr.3: 10992770 - 11038729
ENST00000642735
Protein coding
CCDS2603
Chr.3: 10992754 - 11039233
ENST00000642767
Protein coding
CCDS2603
NM_001348250
Chr.3: 10992728 - 11039247
ENST00000642820
Protein coding
CCDS2603
Chr.3: 10992754 - 11039214
ENST00000643396
Protein coding
CCDS2603
Chr.3: 11011659 - 11039192
ENST00000643498
Protein coding
CCDS2603
Chr.3: 10992748 - 11039058
ENST00000644314
Protein coding
CCDS87043
NM_001348251
Chr.3: 10992767 - 11039168
ENST00000644803
Protein coding
Chr.3: 11017081 - 11039101
ENST00000645029
Protein coding
CCDS2603
Chr.3: 11015447 - 11039179
ENST00000645054
Protein coding
CCDS2603
Chr.3: 10992754 - 11039230
ENST00000645281
Protein coding
CCDS87044
Chr.3: 10992751 - 11039148
ENST00000645592
Protein coding
CCDS2603
Chr.3: 10992762 - 11039169
ENST00000645776
Protein coding
CCDS87044
NM_001348253
Chr.3: 10992758 - 11038648
ENST00000645974
Protein coding
CCDS2603
Chr.3: 10992762 - 11039230
ENST00000645985
Protein coding
Chr.3: 11017403 - 11036917
ENST00000646022
Protein coding
CCDS2603
Chr.3: 10992755 - 11039186
ENST00000646060
Protein coding
CCDS2603
Chr.3: 10992793 - 11039169
ENST00000646072
Protein coding
CCDS87044
NM_001348252
Chr.3: 10992748 - 11039169
ENST00000646487
Protein coding
Chr.3: 10992807 - 11039235
ENST00000646570
Protein coding
CCDS2603
Chr.3: 10992748 - 11039187
ENST00000646702
Protein coding
CCDS2603
Chr.3: 10992186 - 11039174
ENST00000646836
Retained intron
Chr.3: 11030801 - 11039169
ENST00000646886
Retained intron
Chr.3: 10992790 - 11039148
ENST00000646924
Protein coding
CCDS2603
Chr.3: 10992762 - 11039171
ENST00000647194
Protein coding
CCDS2603
Chr.3: 10992874 - 11039082