Assay name
HS_PPARG_1765083 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PPARG
Assay targets 21 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 21 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
PPARG
Gene aliases
PPARG1;PPARG2;NR1C3;PPARgamma
Species
Homo sapiens
Main target
ENST00000652522
Exons numbers
4-5
Ensembl exons ids
ENSE00003663534;ENSE00003791065
Amplicon start
402
Amplicon length
116
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000287820
Protein coding
CCDS2609
NM_015869;NM_001354668
Chr.3: 12351472 - 12434356
ENST00000309576
Protein coding
Chr.3: 12287860 - 12434344
ENST00000396999
Nonsense mediated decay
Chr.3: 12379706 - 12433903
ENST00000397000
Protein coding
Chr.3: 12312388 - 12434216
ENST00000397010
Protein coding
Chr.3: 12287368 - 12434344
ENST00000397012
Protein coding
CCDS2610
NM_138711;NM_001354667
Chr.3: 12288838 - 12434356
ENST00000397015
Protein coding
Chr.3: 12287884 - 12434344
ENST00000397023
Nonsense mediated decay
Chr.3: 12351569 - 12434344
ENST00000397026
Protein coding
Chr.3: 12289071 - 12434339
ENST00000397029
Protein coding
Chr.3: 12287388 - 12381491
ENST00000477039
Retained intron
Chr.3: 12351472 - 12406846
ENST00000497594
Retained intron
Chr.3: 12289111 - 12406846
ENST00000643197
Protein coding
Chr.3: 12287983 - 12434162
ENST00000643888
Protein coding
Chr.3: 12287943 - 12434162
ENST00000644622
Protein coding
Chr.3: 12287987 - 12434162
ENST00000650650
Protein coding
Chr.3: 12379706 - 12417154
ENST00000650761
Protein coding
CCDS2610
NM_001354666;NM_138712;NM_001354669
Chr.3: 12287850 - 12434356
ENST00000650840
Protein coding
CCDS87046
NM_001354670;NM_001330615
Chr.3: 12379706 - 12433915
ENST00000651735
Protein coding
Chr.3: 12289070 - 12434344
ENST00000651826
Protein coding
CCDS2610
NM_005037
Chr.3: 12287850 - 12434356
ENST00000652522
Protein coding
Chr.3: 12289067 - 12417102