Assay name​
HS_ST3GAL5_1778504 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for ST3GAL5
Assay targets 47 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 47 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
ST3GAL5
Gene aliases​
ST3GalV;SIATGM3S;SIAT9
Species​
Homo sapiens
Main target​
ENST00000639743
Exons numbers​
3-4
Ensembl exons ids​
ENSE00003639875;ENSE00003807150
Amplicon start​
4271
Amplicon length​
125
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000306262
Nonsense mediated decay
Chr.2: 85846406 - 85888988
ENST00000377332
Protein coding
Chr.2: 85839169 - 85888958
ENST00000393805
Protein coding
CCDS86856
NM_001354238;NM_001354248
Chr.2: 85839149 - 85887580
ENST00000393808
Protein coding
CCDS42705
NM_001042437
Chr.2: 85839149 - 85867670
ENST00000461206
Processed transcript
Chr.2: 85839149 - 85849576
ENST00000638178
Protein coding
Chr.2: 85839204 - 85888685
ENST00000638227
Nonsense mediated decay
Chr.2: 85839194 - 85889000
ENST00000638288
Nonsense mediated decay
Chr.2: 85839206 - 85888721
ENST00000638484
Nonsense mediated decay
Chr.2: 85839196 - 85888958
ENST00000638523
Nonsense mediated decay
Chr.2: 85839883 - 85863464
ENST00000638542
Nonsense mediated decay
Chr.2: 85839196 - 85888958
ENST00000638572
Protein coding
CCDS1986
NM_003896
Chr.2: 85837120 - 85888990
ENST00000638581
Processed transcript
Chr.2: 85840065 - 85870179
ENST00000638659
Nonsense mediated decay
Chr.2: 85839169 - 85888904
ENST00000638855
Nonsense mediated decay
Chr.2: 85839204 - 85889000
ENST00000638885
Nonsense mediated decay
Chr.2: 85839196 - 85888939
ENST00000638956
Nonsense mediated decay
Chr.2: 85839210 - 85889037
ENST00000638986
Protein coding
CCDS86856
NM_001354226;NM_001354233;NM_001354224;NM_001354229
Chr.2: 85839206 - 85888910
ENST00000639119
Protein coding
CCDS86857
NM_001363847
Chr.2: 85839169 - 85888963
ENST00000639184
Nonsense mediated decay
Chr.2: 85839196 - 85888747
ENST00000639305
Protein coding
Chr.2: 85839206 - 85888903
ENST00000639311
Nonsense mediated decay
Chr.2: 85839169 - 85888906
ENST00000639421
Nonsense mediated decay
Chr.2: 85846448 - 85888905
ENST00000639432
Protein coding
CCDS86856
Chr.2: 85839196 - 85888401
ENST00000639541
Nonsense mediated decay
Chr.2: 85839206 - 85888997
ENST00000639608
Nonsense mediated decay
Chr.2: 85839206 - 85888990
ENST00000639743
Retained intron
Chr.2: 85839194 - 85856448
ENST00000639820
Nonsense mediated decay
Chr.2: 85839196 - 85888959
ENST00000639867
Retained intron
Chr.2: 85837628 - 85850929
ENST00000639945
Nonsense mediated decay
Chr.2: 85839210 - 85888908
ENST00000640024
Nonsense mediated decay
Chr.2: 85839196 - 85888967
ENST00000640222
Nonsense mediated decay
Chr.2: 85839198 - 85888826
ENST00000640295
Nonsense mediated decay
Chr.2: 85839196 - 85888905
ENST00000640314
Nonsense mediated decay
Chr.2: 85839282 - 85888881
ENST00000640322
Protein coding
CCDS86856
Chr.2: 85839150 - 85902543
ENST00000640378
Nonsense mediated decay
Chr.2: 85839149 - 85861231
ENST00000640418
Protein coding
Chr.2: 85839188 - 85905199
ENST00000640425
Nonsense mediated decay
Chr.2: 85839196 - 85888888
ENST00000640453
Processed transcript
Chr.2: 85839196 - 85850198
ENST00000640572
Nonsense mediated decay
Chr.2: 85839265 - 85888888
ENST00000640712
Retained intron
Chr.2: 85839151 - 85855525
ENST00000640763
Nonsense mediated decay
Chr.2: 85839178 - 85861217
ENST00000640798
Retained intron
NM_001354247
Chr.2: 85839196 - 85854175
ENST00000640849
Nonsense mediated decay
Chr.2: 85844408 - 85863462
ENST00000640903
Nonsense mediated decay
Chr.2: 85839263 - 85870239
ENST00000640982
Protein coding
CCDS86856
NM_001354227;NM_001354223
Chr.2: 85839196 - 85888762
ENST00000640992
Protein coding
CCDS86856
NM_001354234
Chr.2: 85839196 - 85888776