Assay name​
HS_ARID1A_1795079 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for ARID1A
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
ARID1A
Gene aliases​
B120;P270;C10rf4;BAF250;BAF250a;C1orf4;SMARCF1
Species​
Homo sapiens
Main target​
ENST00000637465
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003516715;ENSE00003795421
Amplicon start​
262
Amplicon length​
90
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000324856
Protein coding
CCDS285
NM_006015
Chr.1: 26696015 - 26782104
ENST00000374152
Protein coding
Chr.1: 26728912 - 26780756
ENST00000430799
Protein coding
Chr.1: 26693236 - 26781177
ENST00000457599
Protein coding
CCDS44091
NM_139135
Chr.1: 26696404 - 26780817
ENST00000524572
Protein coding
Chr.1: 26727708 - 26731318
ENST00000615191
Protein coding
Chr.1: 26729380 - 26774901
ENST00000636219
Protein coding
Chr.1: 26729657 - 26782102
ENST00000637465
Protein coding
Chr.1: 26696032 - 26731568