Assay name​
HS_PTPRK_1796023 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for PTPRK
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
PTPRK
Gene aliases​
R-PTP-kappa
Species​
Homo sapiens
Main target​
ENST00000524481
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003585163;ENSE00003631327
Amplicon start​
421
Amplicon length​
75
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000368207
Protein coding
Chr.6: 127970113 - 128520583
ENST00000368210
Protein coding
Chr.6: 127969837 - 128520616
ENST00000368213
Protein coding
CCDS47473
NM_001135648
Chr.6: 127968977 - 128520583
ENST00000368215
Protein coding
CCDS75517
NM_001291984
Chr.6: 127969896 - 128520358
ENST00000368226
Protein coding
CCDS5137
NM_002844
Chr.6: 127968779 - 128520674
ENST00000392449
Nonsense mediated decay
Chr.6: 128321403 - 128520565
ENST00000495748
Processed transcript
Chr.6: 128219070 - 128491857
ENST00000524481
Processed transcript
Chr.6: 127999987 - 128520599
ENST00000524534
Processed transcript
Chr.6: 128063436 - 128520515
ENST00000525459
Protein coding
Chr.6: 128321041 - 128520587
ENST00000532331
Protein coding
CCDS78179
NM_001291981
Chr.6: 127968977 - 128520476
ENST00000532751
Nonsense mediated decay
Chr.6: 128322251 - 128520599