Assay name
HS_TNFRSF25_1797980 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for TNFRSF25
Best transcript assay for ENST00000377782
Assay targets 14 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000377782
Assay targets 14 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
TNFRSF25
Gene aliases
DR3;TRAMP;WSL-1;LARD;WSL-LR;DDR3;TR3;APO-3;TNFRSF12
Species
Homo sapiens
Main target
ENST00000377782
Exons numbers
4-5
Ensembl exons ids
ENSE00003684931;ENSE00001150593
Amplicon start
453
Amplicon length
96
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000348333
Protein coding
CCDS74
NM_148967
Chr.1: 6461434 - 6466107
ENST00000351959
Protein coding
CCDS73
NM_148966
Chr.1: 6461204 - 6466175
ENST00000356876
Protein coding
CCDS71
NM_003790
Chr.1: 6461151 - 6466195
ENST00000377782
Protein coding
CCDS72
NM_148965
Chr.1: 6461151 - 6466175
ENST00000414040
Nonsense mediated decay
Chr.1: 6461434 - 6466107
ENST00000453341
Retained intron
Chr.1: 6464111 - 6466099
ENST00000461703
Processed transcript
Chr.1: 6463536 - 6466107
ENST00000469691
Retained intron
Chr.1: 6461994 - 6465272
ENST00000480393
Nonsense mediated decay
Chr.1: 6461151 - 6466175
ENST00000481401
Protein coding
Chr.1: 6462637 - 6465630
ENST00000485036
Nonsense mediated decay
Chr.1: 6461151 - 6466175
ENST00000502588
Nonsense mediated decay
Chr.1: 6461434 - 6466107
ENST00000510563
Nonsense mediated decay
NM_001039664
Chr.1: 6461434 - 6466107
ENST00000647810
Protein coding
Chr.1: 6460786 - 6465470