Assay name
HS_SCN8A_1808813 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SCN8A
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
SCN8A
Gene aliases
Nav1.6;NaCh6;PN4;CerIII;CIAT;MED
Species
Homo sapiens
Main target
ENST00000354534
Exons numbers
8-9
Ensembl exons ids
ENSE00001275428;ENSE00001673780
Amplicon start
1134
Amplicon length
103
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000354534
Protein coding
CCDS44891
NM_014191
Chr.12: 51591236 - 51812864
ENST00000355133
Protein coding
CCDS53794
Chr.12: 51662818 - 51807429
ENST00000545061
Protein coding
CCDS53794
NM_001177984
Chr.12: 51591236 - 51812864
ENST00000550891
Retained intron
Chr.12: 51590926 - 51766251
ENST00000551216
Protein coding
Chr.12: 51686423 - 51745948
ENST00000599343
Protein coding
Chr.12: 51662818 - 51807429
ENST00000627620
Protein coding
CCDS81692
NM_001330260
Chr.12: 51662818 - 51807429
ENST00000637709
Nonsense mediated decay
Chr.12: 51591224 - 51702909
ENST00000638820
Protein coding
Chr.12: 51590925 - 51723140