Assay name
HS_MUC1_1815110 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for MUC1
Assay targets 26 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 26 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
MUC1
Gene aliases
CD227;PEM;ADMCKD;ADMCKD1;MCKD;MCD;KL-6;EMA;Ca15-3;PUM;MCKD1
Species
Homo sapiens
Main target
ENST00000438413
Exons numbers
6-7
Ensembl exons ids
ENSE00003619154;ENSE00003644780
Amplicon start
635
Amplicon length
107
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000337604
Protein coding
CCDS1098
NM_002456;NM_001204287
Chr.1: 155186123 - 155192868
ENST00000338684
Protein coding
CCDS72934
NM_001204289;NM_001204291
Chr.1: 155185826 - 155192915
ENST00000342482
Protein coding
Chr.1: 155186123 - 155192867
ENST00000343256
Protein coding
CCDS41409
NM_001044390;NM_001204296
Chr.1: 155186123 - 155192867
ENST00000368389
Protein coding
NM_001204297
Chr.1: 155186123 - 155192867
ENST00000368390
Protein coding
CCDS30883
NM_001018017
Chr.1: 155186123 - 155192867
ENST00000368392
Protein coding
CCDS30882
NM_001204288;NM_001018016
Chr.1: 155185948 - 155192893
ENST00000368393
Protein coding
CCDS55642
NM_001204293
Chr.1: 155185948 - 155192893
ENST00000368396
Protein coding
CCDS41408
NM_001044391;NM_001044392
Chr.1: 155186123 - 155192867
ENST00000368398
Protein coding
CCDS55641
NM_001204294
Chr.1: 155186123 - 155192867
ENST00000438413
Protein coding
NM_001204290
Chr.1: 155185948 - 155192893
ENST00000457295
Protein coding
Chr.1: 155185948 - 155192893
ENST00000462215
Protein coding
Chr.1: 155185948 - 155192893
ENST00000462317
Protein coding
Chr.1: 155185827 - 155188351
ENST00000467134
Nonsense mediated decay
Chr.1: 155186123 - 155192867
ENST00000471283
Protein coding
NM_001044393
Chr.1: 155186123 - 155192867
ENST00000485118
Protein coding
Chr.1: 155185830 - 155187767
ENST00000498431
Nonsense mediated decay
Chr.1: 155186123 - 155192867
ENST00000610359
Protein coding
CCDS72935
NM_001204292
Chr.1: 155185826 - 155192915
ENST00000610468
Nonsense mediated decay
Chr.1: 155185948 - 155192893
ENST00000611571
Protein coding
Chr.1: 155185826 - 155192915
ENST00000611577
Protein coding
Chr.1: 155185826 - 155192915
ENST00000612778
Protein coding
CCDS72933
NM_001204286
Chr.1: 155185826 - 155192915
ENST00000614519
Protein coding
Chr.1: 155185826 - 155192915
ENST00000615517
Protein coding
CCDS72936
NM_001204295
Chr.1: 155185826 - 155192915
ENST00000620103
Protein coding
CCDS55640
NM_001204285
Chr.1: 155185824 - 155192915