Assay name
HS_SPOP_1836715 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SPOP
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
SPOP
Gene aliases
TEF2;BTBD32
Species
Homo sapiens
Main target
ENST00000503676
Exons numbers
4-5
Ensembl exons ids
ENSE00003784716;ENSE00003680879
Amplicon start
820
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000347630
Protein coding
CCDS11551
NM_001007229;NM_001007230
Chr.17: 49598886 - 49678163
ENST00000393328
Protein coding
CCDS11551
NM_003563;NM_001007226
Chr.17: 49598884 - 49678110
ENST00000503676
Protein coding
CCDS11551
Chr.17: 49600203 - 49646630
ENST00000504102
Protein coding
CCDS11551
NM_001007227;NM_001007228
Chr.17: 49598884 - 49678097
ENST00000505581
Protein coding
Chr.17: 49607874 - 49678085
ENST00000506399
Nonsense mediated decay
Chr.17: 49611338 - 49678106
ENST00000507970
Protein coding
Chr.17: 49611381 - 49678055
ENST00000509079
Protein coding
Chr.17: 49607300 - 49678110
ENST00000514121
Protein coding
Chr.17: 49619046 - 49678099
ENST00000515508
Protein coding
Chr.17: 49619234 - 49678025