Assay name​
HS_NRXN1_1889701 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for NRXN1
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
NRXN1
Gene aliases​
KIAA0578;Hs.22998
Species​
Homo sapiens
Main target​
ENST00000406316
Exons numbers​
18-19
Ensembl exons ids​
ENSE00002446452;ENSE00003437132
Amplicon start​
5025
Amplicon length​
138
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000342183
Protein coding
CCDS1845
NM_138735;NM_001330097
Chr.2: 49920763 - 50347754
ENST00000401669
Protein coding
CCDS82451
NM_001330078;NM_001330093;NM_001330094;NM_001330085;NM_001330086
Chr.2: 49918503 - 51032132
ENST00000401710
Protein coding
CCDS82446
NM_001330092
Chr.2: 49921307 - 50347766
ENST00000404971
Protein coding
CCDS46282
NM_001135659
Chr.2: 49920350 - 51032399
ENST00000405472
Protein coding
NM_001330096;NM_001330087;NM_001330084;NM_001330088
Chr.2: 49921763 - 51032114
ENST00000406316
Protein coding
CCDS54360
NM_001330083;NM_001330095;NM_004801
Chr.2: 49918505 - 51032561
ENST00000611589
Protein coding
Chr.2: 49921642 - 50347254
ENST00000625672
Protein coding
CCDS82450
NM_001330082
Chr.2: 49918505 - 51028456
ENST00000628364
Protein coding
CCDS82447
NM_001330091
Chr.2: 49921757 - 50347796
ENST00000630543
Protein coding
CCDS82449
NM_001330077
Chr.2: 49921944 - 51028273
ENST00000635264
Processed transcript
Chr.2: 49921995 - 50417255
ENST00000637889
Processed transcript
Chr.2: 50022692 - 50497378
ENST00000637906
Nonsense mediated decay
Chr.2: 49921586 - 50346832