Assay name
HS_BDNF-AS_1900209 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for BDNF-AS
Best transcript assay for ENST00000501176
Assay targets 43 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Best transcript assay for ENST00000501176
Assay targets 43 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Gene symbol
BDNF-AS
Gene aliases
BT2A;BT2B;BT2C;BT2D;NCRNA00049;BDNF-AS1;BDNFAS;BDNFOS
Species
Homo sapiens
Main target
ENST00000501176
Exons numbers
4-5
Ensembl exons ids
ENSE00001977826;ENSE00003849954
Amplicon start
322
Amplicon length
99
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000499008
Antisense
Chr.11: 27506852 - 27677805
ENST00000499568
Antisense
Chr.11: 27506852 - 27698171
ENST00000500662
Antisense
Chr.11: 27506852 - 27698171
ENST00000501176
Antisense
Chr.11: 27506852 - 27677805
ENST00000501663
Antisense
Chr.11: 27506847 - 27677805
ENST00000502161
Antisense
Chr.11: 27506847 - 27698231
ENST00000530686
Antisense
Chr.11: 27506838 - 27677492
ENST00000532965
Antisense
Chr.11: 27506849 - 27658333
ENST00000650703
Antisense
Chr.11: 27506865 - 27677579
ENST00000650815
Antisense
Chr.11: 27506847 - 27677805
ENST00000650855
Antisense
Chr.11: 27506847 - 27677805
ENST00000650862
Antisense
Chr.11: 27506847 - 27698231
ENST00000650864
Antisense
Chr.11: 27506830 - 27698087
ENST00000650880
Antisense
Chr.11: 27506847 - 27698231
ENST00000651026
Antisense
Chr.11: 27506857 - 27694309
ENST00000651103
Antisense
Chr.11: 27506847 - 27698231
ENST00000651123
Antisense
Chr.11: 27506857 - 27659190
ENST00000651152
Antisense
Chr.11: 27506847 - 27677805
ENST00000651193
Antisense
Chr.11: 27506844 - 27677805
ENST00000651218
Antisense
Chr.11: 27506849 - 27677805
ENST00000651238
Antisense
Chr.11: 27506847 - 27698231
ENST00000651252
Antisense
Chr.11: 27506849 - 27677410
ENST00000651264
Antisense
Chr.11: 27506857 - 27698152
ENST00000651437
Antisense
Chr.11: 27506847 - 27698231
ENST00000651635
Antisense
Chr.11: 27506847 - 27677805
ENST00000651707
Antisense
Chr.11: 27506847 - 27677805
ENST00000651742
Antisense
Chr.11: 27506847 - 27677805
ENST00000651756
Antisense
Chr.11: 27506847 - 27698231
ENST00000651796
Antisense
Chr.11: 27506847 - 27677805
ENST00000651926
Antisense
Chr.11: 27639943 - 27675789
ENST00000651944
Antisense
Chr.11: 27506842 - 27694563
ENST00000651990
Antisense
Chr.11: 27506849 - 27694544
ENST00000651997
Antisense
Chr.11: 27506852 - 27694652
ENST00000652063
Antisense
Chr.11: 27506830 - 27693971
ENST00000652133
Antisense
Chr.11: 27506859 - 27677804
ENST00000652138
Antisense
Chr.11: 27506847 - 27698231
ENST00000652212
Antisense
Chr.11: 27506849 - 27677634
ENST00000652325
Antisense
Chr.11: 27506847 - 27698231
ENST00000652516
Antisense
Chr.11: 27506845 - 27694128
ENST00000652574
Antisense
Chr.11: 27506852 - 27677805
ENST00000652594
Antisense
Chr.11: 27506847 - 27698231
ENST00000652663
Antisense
Chr.11: 27506842 - 27660749
ENST00000652754
Antisense
Chr.11: 27506847 - 27677805