Assay name
HS_CDK5RAP1_2474699 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CDK5RAP1
Best transcript assay for ENST00000357886
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000357886
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CDK5RAP1
Gene aliases
CGI-05;HSPC167;C42;C20orf34
Species
Homo sapiens
Main target
ENST00000357886
Exons numbers
9-10
Ensembl exons ids
ENSE00003708909;ENSE00003703143
Amplicon start
1220
Amplicon length
103
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000346416
Protein coding
CCDS13219
NM_016082;NM_001278167;NM_016408
Chr.20: 33358839 - 33401519
ENST00000357886
Protein coding
NM_001365728
Chr.20: 33358839 - 33401561
ENST00000471264
Processed transcript
Chr.20: 33370499 - 33401452
ENST00000473791
Retained intron
Chr.20: 33373601 - 33379588
ENST00000473997
Protein coding
NM_001278169
Chr.20: 33358839 - 33401517
ENST00000477105
Processed transcript
Chr.20: 33374115 - 33401505
ENST00000496381
Processed transcript
Chr.20: 33360351 - 33401478