Assay name
HS_CTSB_2474745 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for CTSB
Best transcript assay for ENST00000534510
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000534510
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
CTSB
Species
Homo sapiens
Main target
ENST00000534510
Exons numbers
9-10
Ensembl exons ids
ENSE00003562494;ENSE00002021052
Amplicon start
913
Amplicon length
112
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000345125
Protein coding
CCDS5986
NM_147781
Chr.8: 11844340 - 11868079
ENST00000353047
Protein coding
CCDS5986
NM_001908
Chr.8: 11842524 - 11868087
ENST00000420692
Retained intron
Chr.8: 11844020 - 11848703
ENST00000453527
Protein coding
CCDS5986
NM_147783
Chr.8: 11844320 - 11868087
ENST00000530624
Processed transcript
Chr.8: 11845661 - 11848509
ENST00000530640
Protein coding
CCDS5986
Chr.8: 11844053 - 11868112
ENST00000531089
Protein coding
CCDS5986
Chr.8: 11844094 - 11868112
ENST00000531551
Nonsense mediated decay
Chr.8: 11844324 - 11868040
ENST00000533455
Protein coding
CCDS5986
NM_001317237;NM_147782;NM_147780
Chr.8: 11844355 - 11868106
ENST00000534510
Protein coding
CCDS5986
Chr.8: 11844370 - 11868106