Assay name
HS_FANCA_2474816 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for FANCA
Best transcript assay for ENST00000568369
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000568369
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
FANCA
Gene aliases
FAA;FA-H;FAH;FACA;FANCH
Species
Homo sapiens
Main target
ENST00000568369
Exons numbers
28-29
Ensembl exons ids
ENSE00002280798;ENSE00002230460
Amplicon start
2782
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000305699
Retained intron
Chr.16: 89739741 - 89765039
ENST00000389301
Protein coding
CCDS32515
NM_000135
Chr.16: 89737549 - 89816647
ENST00000561660
Nonsense mediated decay
Chr.16: 89745027 - 89765044
ENST00000563318
Nonsense mediated decay
Chr.16: 89752161 - 89767147
ENST00000563510
Nonsense mediated decay
Chr.16: 89748764 - 89764947
ENST00000567988
Nonsense mediated decay
Chr.16: 89742902 - 89765004
ENST00000568369
Protein coding
CCDS67099
NM_001286167
Chr.16: 89738403 - 89816646