Assay name
HS_LIG1_2474997 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for LIG1
Best transcript assay for ENST00000613670
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000613670
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
LIG1
Gene aliases
LIGI;hLig1
Species
Homo sapiens
Main target
ENST00000613670
Exons numbers
1-2
Ensembl exons ids
ENSE00003049356;ENSE00003584490
Amplicon start
25
Amplicon length
125
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000263274
Protein coding
CCDS12711
NM_001320970;NM_000234
Chr.19: 48115445 - 48170344
ENST00000536218
Protein coding
CCDS74410
NM_001289064
Chr.19: 48115446 - 48170603
ENST00000542460
Nonsense mediated decay
Chr.19: 48136044 - 48170322
ENST00000593425
Protein coding
Chr.19: 48153901 - 48169689
ENST00000594759
Nonsense mediated decay
Chr.19: 48115450 - 48170326
ENST00000596549
Protein coding
Chr.19: 48150132 - 48170314
ENST00000599165
Processed transcript
Chr.19: 48149826 - 48170329
ENST00000600055
Retained intron
Chr.19: 48161174 - 48170344
ENST00000601091
Nonsense mediated decay
Chr.19: 48115524 - 48170252
ENST00000613670
Protein coding
Chr.19: 48115524 - 48165627