Assay name
HS_SPARC_2475244 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for SPARC
Best transcript assay for ENST00000521569
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000521569
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
SPARC
Gene aliases
ONT;BM-40;ON
Species
Homo sapiens
Main target
ENST00000521569
Exons numbers
5-6
Ensembl exons ids
ENSE00003476002;ENSE00002109941
Amplicon start
537
Amplicon length
61
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000231061
Protein coding
CCDS4318
NM_001309443;NM_001309444;NM_003118
Chr.5: 151661096 - 151686915
ENST00000520687
Retained intron
Chr.5: 151662488 - 151667654
ENST00000521569
Protein coding
Chr.5: 151666477 - 151686968
ENST00000537849
Processed transcript
Chr.5: 151666425 - 151667584
ENST00000538026
Protein coding
Chr.5: 151666373 - 151686963