Assay name
HS_VIM_2475342 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for VIM
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
VIM
Species
Homo sapiens
Main target
ENST00000544301
Exons numbers
3-5
Ensembl exons ids
ENSE00001270958;ENSE00000692805;ENSE00003614198
Amplicon start
1042
Amplicon length
123
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000224237
Protein coding
CCDS7120
Chr.10: 17229278 - 17237593
ENST00000421459
Retained intron
Chr.10: 17230609 - 17235085
ENST00000469543
Nonsense mediated decay
Chr.10: 17230004 - 17237593
ENST00000487938
Nonsense mediated decay
Chr.10: 17229278 - 17237593
ENST00000544301
Protein coding
CCDS7120
NM_003380
Chr.10: 17228241 - 17237593
ENST00000637053
Processed transcript
Chr.10: 17230654 - 17234124