Assay name
MM_ATP2C1_1941398 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Atp2c1
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Atp2c1
Species
Mus musculus
Main target
ENSMUST00000190802
Exons numbers
5-7
Ensembl exons ids
ENSMUSE00001252010;ENSMUSE00001222699;ENSMUSE00001324469
Amplicon start
628
Amplicon length
130
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000038118
Protein coding
CCDS40752
NM_001359822;NM_001359823;NM_175025
Chr.9: 105411358 - 105495133
ENSMUST00000085133
Protein coding
CCDS57698
NM_001253831
Chr.9: 105411363 - 105521257
ENSMUST00000112558
Protein coding
CCDS40752
NM_001253834
Chr.9: 105410438 - 105495094
ENSMUST00000163879
Protein coding
CCDS57697
NM_001253836
Chr.9: 105422768 - 105495077
ENSMUST00000176036
Protein coding
Chr.9: 105459660 - 105495483
ENSMUST00000176363
Protein coding
Chr.9: 105453538 - 105495105
ENSMUST00000176651
Protein coding
Chr.9: 105451825 - 105470390
ENSMUST00000176770
Protein coding
Chr.9: 105403539 - 105521147
ENSMUST00000176960
Processed transcript
Chr.9: 105446054 - 105494462
ENSMUST00000177074
Protein coding
Chr.9: 105403546 - 105494420
ENSMUST00000177189
Retained intron
Chr.9: 105453482 - 105495495
ENSMUST00000190802
Processed transcript
Chr.9: 105459660 - 105527319