Assay name
MM_ATR_1951542 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Atr
Best transcript assay for ENSMUST00000189602
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENSMUST00000189602
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Atr
Species
Mus musculus
Main target
ENSMUST00000189602
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00001335798;ENSMUSE00001335368
Amplicon start
188
Amplicon length
119
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000034980
Protein coding
Chr.9: 95857597 - 95951644
ENSMUST00000185473
Retained intron
Chr.9: 95857639 - 95904038
ENSMUST00000187356
Retained intron
Chr.9: 95857597 - 95868312
ENSMUST00000189602
Retained intron
Chr.9: 95857650 - 95863538
ENSMUST00000191269
Retained intron
Chr.9: 95857669 - 95869904
ENSMUST00000215311
Protein coding
CCDS52890
NM_019864
Chr.9: 95857706 - 95951781