Assay name
MM_CLOCK_1996066 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Clock
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Clock
Species
Mus musculus
Main target
ENSMUST00000202857
Exons numbers
6-7
Ensembl exons ids
ENSMUSE00001359841;ENSMUSE00001359807
Amplicon start
483
Amplicon length
117
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000075159
Protein coding
CCDS19360
NM_007715
Chr.5: 76212177 - 76304548
ENSMUST00000200957
Processed transcript
Chr.5: 76253226 - 76304772
ENSMUST00000202122
Protein coding
CCDS84889
NM_001305222
Chr.5: 76213853 - 76274012
ENSMUST00000202651
Protein coding
CCDS19360
NM_001289826
Chr.5: 76209868 - 76304792
ENSMUST00000202857
Retained intron
Chr.5: 76235117 - 76304754