Assay name​
MM_CUX1_2007867 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Cux1
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
Cux1
Species​
Mus musculus
Main target​
ENSMUST00000176501
Exons numbers​
3-4
Ensembl exons ids​
ENSMUSE00001276248;ENSMUSE00001210267
Amplicon start​
212
Amplicon length​
83
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000004097
Protein coding
CCDS39328
NM_009986
Chr.5: 136266415 - 136567445
ENSMUST00000175918
Nonsense mediated decay
Chr.5: 136248510 - 136567278
ENSMUST00000175975
Protein coding
CCDS71684
NM_001291234
Chr.5: 136268367 - 136567246
ENSMUST00000176172
Protein coding
Chr.5: 136274486 - 136565432
ENSMUST00000176216
Protein coding
CCDS71685
NM_001291238;NM_001291240
Chr.5: 136248135 - 136567248
ENSMUST00000176501
Retained intron
Chr.5: 136362295 - 136567252
ENSMUST00000176745
Protein coding
CCDS57391
NM_198602;NM_001291239
Chr.5: 136248135 - 136567264
ENSMUST00000176778
Protein coding
NM_001291233
Chr.5: 136274455 - 136566351
ENSMUST00000177297
Nonsense mediated decay
Chr.5: 136250527 - 136567263