Assay name
MM_ATG9A_2034649 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Atg9a
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Atg9a
Species
Mus musculus
Main target
ENSMUST00000189820
Exons numbers
3-4
Ensembl exons ids
ENSMUSE00000600137;ENSMUSE00000600138
Amplicon start
152
Amplicon length
110
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000040689
Protein coding
CCDS35622
NM_001003917;NM_001288613
Chr.1: 75180866 - 75191923
ENSMUST00000188347
Protein coding
CCDS35622
NM_001288612
Chr.1: 75180865 - 75192196
ENSMUST00000188430
Retained intron
Chr.1: 75187557 - 75191725
ENSMUST00000189665
Nonsense mediated decay
Chr.1: 75180865 - 75191923
ENSMUST00000189702
Protein coding
CCDS35622
Chr.1: 75180860 - 75191926
ENSMUST00000189820
Protein coding
Chr.1: 75180865 - 75190382