Assay name
MM_SPHK1_2075417 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Sphk1
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 13 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Sphk1
Species
Mus musculus
Main target
ENSMUST00000063396
Exons numbers
3-4
Ensembl exons ids
ENSMUSE00001240270;ENSMUSE00000909274
Amplicon start
1488
Amplicon length
69
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000063396
Protein coding
CCDS25668
NM_025367
Chr.11: 116532925 - 116536657
ENSMUST00000063446
Protein coding
CCDS25668
Chr.11: 116532473 - 116536674
ENSMUST00000100201
Protein coding
CCDS48986
NM_001172475
Chr.11: 116531911 - 116536670
ENSMUST00000106386
Protein coding
CCDS25668
NM_001172472;NM_001172473
Chr.11: 116532444 - 116536674
ENSMUST00000106387
Protein coding
CCDS25668
Chr.11: 116531744 - 116536657
ENSMUST00000106388
Protein coding
CCDS25668
Chr.11: 116530925 - 116536657
ENSMUST00000124682
Protein coding
Chr.11: 116533575 - 116535698
ENSMUST00000134834
Retained intron
Chr.11: 116532451 - 116536668
ENSMUST00000138840
Protein coding
Chr.11: 116531121 - 116535700
ENSMUST00000141798
Protein coding
CCDS25669
NM_011451
Chr.11: 116534740 - 116536670
ENSMUST00000145737
Protein coding
Chr.11: 116532454 - 116535712
ENSMUST00000154034
Protein coding
Chr.11: 116533268 - 116535995
ENSMUST00000155102
Protein coding
Chr.11: 116532457 - 116535341