Assay name
MM_VCAN_2077950 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Vcan
Best transcript assay for ENSMUST00000162715
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENSMUST00000162715
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Vcan
Species
Mus musculus
Main target
ENSMUST00000162715
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00000119432;ENSMUSE00000853364
Amplicon start
337
Amplicon length
86
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000109543
Protein coding
CCDS49322
NM_001134475
Chr.13: 89657056 - 89742244
ENSMUST00000109544
Protein coding
CCDS49324
NM_001134474
Chr.13: 89656645 - 89742334
ENSMUST00000109546
Protein coding
CCDS36740
NM_001081249
Chr.13: 89655312 - 89742509
ENSMUST00000159337
Protein coding
CCDS49321
NM_172955
Chr.13: 89711226 - 89742318
ENSMUST00000159910
Protein coding
CCDS49323
NM_019389
Chr.13: 89656340 - 89742322
ENSMUST00000162715
Protein coding
Chr.13: 89725434 - 89740397