Assay name​
MM_PAX6_2168740 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Pax6
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
Pax6
Species​
Mus musculus
Main target​
ENSMUST00000090391
Exons numbers​
11-12
Ensembl exons ids​
ENSMUSE00001229663;ENSMUSE00001311933
Amplicon start​
1855
Amplicon length​
93
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000090391
Protein coding
CCDS16499
NM_013627
Chr.2: 105676128 - 105697071
ENSMUST00000090397
Protein coding
CCDS57181
NM_001310144
Chr.2: 105675191 - 105697242
ENSMUST00000111082
Protein coding
CCDS57181
NM_001244202
Chr.2: 105676129 - 105697361
ENSMUST00000111083
Protein coding
CCDS57181
Chr.2: 105675527 - 105697071
ENSMUST00000111085
Protein coding
CCDS16499
Chr.2: 105675433 - 105697344
ENSMUST00000111086
Protein coding
CCDS16499
NM_001244198
Chr.2: 105668900 - 105697364
ENSMUST00000111087
Protein coding
CCDS57181
NM_001244201;NM_001310145;NM_001310146
Chr.2: 105668900 - 105697364
ENSMUST00000146803
Processed transcript
Chr.2: 105685322 - 105697364
ENSMUST00000154643
Retained intron
Chr.2: 105682535 - 105696353
ENSMUST00000167211
Protein coding
CCDS16499
NM_001244200
Chr.2: 105675513 - 105697361