Assay name​
MM_PDGFA_2177096 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for Pdgfa
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
Pdgfa
Species​
Mus musculus
Main target​
ENSMUST00000124080
Exons numbers​
2-3
Ensembl exons ids​
ENSMUSE00001270931;ENSMUSE00001311067
Amplicon start​
162
Amplicon length​
84
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000046901
Protein coding
Chr.5: 138976516 - 138994953
ENSMUST00000076095
Protein coding
CCDS19802
NM_008808
Chr.5: 138976014 - 138995037
ENSMUST00000110896
Protein coding
CCDS19802
Chr.5: 138976971 - 138997370
ENSMUST00000110897
Protein coding
CCDS19802
Chr.5: 138976942 - 138996087
ENSMUST00000124080
Processed transcript
Chr.5: 138986270 - 138994484
ENSMUST00000144934
Processed transcript
Chr.5: 138977145 - 138994281