Assay name
MM_PDGFA_2177096 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Pdgfa
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Pdgfa
Species
Mus musculus
Main target
ENSMUST00000124080
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00001270931;ENSMUSE00001311067
Amplicon start
162
Amplicon length
84
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000046901
Protein coding
Chr.5: 138976516 - 138994953
ENSMUST00000076095
Protein coding
CCDS19802
NM_008808
Chr.5: 138976014 - 138995037
ENSMUST00000110896
Protein coding
CCDS19802
Chr.5: 138976971 - 138997370
ENSMUST00000110897
Protein coding
CCDS19802
Chr.5: 138976942 - 138996087
ENSMUST00000124080
Processed transcript
Chr.5: 138986270 - 138994484
ENSMUST00000144934
Processed transcript
Chr.5: 138977145 - 138994281