Assay name
MM_IRAK1_2177258 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Irak1
Best transcript assay for ENSMUST00000148706
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENSMUST00000148706
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Irak1
Species
Mus musculus
Main target
ENSMUST00000148706
Exons numbers
5-6
Ensembl exons ids
ENSMUSE00001204658;ENSMUSE00001265388
Amplicon start
927
Amplicon length
78
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000033769
Protein coding
CCDS53105
NM_001177973
Chr.X: 74014971 - 74023913
ENSMUST00000068286
Protein coding
CCDS30219
NM_001177974
Chr.X: 74013926 - 74023915
ENSMUST00000101458
Protein coding
Chr.X: 74015440 - 74023745
ENSMUST00000114352
Protein coding
CCDS30219
NM_008363
Chr.X: 74013918 - 74023915
ENSMUST00000114353
Protein coding
Chr.X: 74015440 - 74023745
ENSMUST00000114354
Protein coding
CCDS53104
NM_001177975
Chr.X: 74013914 - 74023918
ENSMUST00000114360
Protein coding
CCDS53103
NM_001177976
Chr.X: 74013926 - 74023915
ENSMUST00000126583
Protein coding
Chr.X: 74017130 - 74022496
ENSMUST00000140130
Retained intron
Chr.X: 74021000 - 74022651
ENSMUST00000148706
Retained intron
Chr.X: 74014806 - 74023826
ENSMUST00000149871
Retained intron
Chr.X: 74014806 - 74023826