Assay name​
MM_SH3TC1_2184342 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Sh3tc1
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
Sh3tc1
Species​
Mus musculus
Main target​
ENSMUST00000151555
Exons numbers​
3-4
Ensembl exons ids​
ENSMUSE00001278548;ENSMUSE00001262270
Amplicon start​
1308
Amplicon length​
67
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000070203
Protein coding
CCDS19234
NM_194344
Chr.5: 35697180 - 35729276
ENSMUST00000127288
Nonsense mediated decay
Chr.5: 35697181 - 35723946
ENSMUST00000127825
Protein coding
Chr.5: 35697180 - 35721603
ENSMUST00000129664
Nonsense mediated decay
Chr.5: 35697183 - 35716251
ENSMUST00000151555
Retained intron
Chr.5: 35697185 - 35719238
ENSMUST00000201511
Protein coding
CCDS19234
NM_001359895
Chr.5: 35697183 - 35739987