Assay name
MM_MSH5_2188786 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Msh5
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Msh5
Species
Mus musculus
Main target
ENSMUST00000172536
Exons numbers
8-10
Ensembl exons ids
ENSMUSE00001222225;ENSMUSE00000141685;ENSMUSE00001274490
Amplicon start
931
Amplicon length
92
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000007250
Protein coding
CCDS28674
NM_013600
Chr.17: 35028605 - 35046622
ENSMUST00000097338
Protein coding
CCDS28674
NM_001146215
Chr.17: 35028605 - 35046726
ENSMUST00000165329
Retained intron
Chr.17: 35039146 - 35046525
ENSMUST00000172536
Nonsense mediated decay
Chr.17: 35028683 - 35046542
ENSMUST00000173685
Retained intron
Chr.17: 35039146 - 35043767
ENSMUST00000174556
Nonsense mediated decay
Chr.17: 35037093 - 35046745
ENSMUST00000174603
Nonsense mediated decay
Chr.17: 35028683 - 35046542