Assay name
MM_XPA_2197197 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Xpa
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Xpa
Species
Mus musculus
Main target
ENSMUST00000058232
Exons numbers
3-4
Ensembl exons ids
ENSMUSE00001256378;ENSMUSE00001222222
Amplicon start
449
Amplicon length
68
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000030013
Protein coding
CCDS18146
NM_011728
Chr.4: 46175222 - 46196311
ENSMUST00000058232
Protein coding
Chr.4: 46155347 - 46196311
ENSMUST00000130051
Processed transcript
Chr.4: 46184412 - 46186594
ENSMUST00000132358
Nonsense mediated decay
Chr.4: 46175222 - 46185649
ENSMUST00000141318
Processed transcript
Chr.4: 46175222 - 46185682
ENSMUST00000142380
Protein coding
Chr.4: 46182969 - 46196304