Assay name
MM_SETDB1_2206080 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Setdb1
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Setdb1
Species
Mus musculus
Main target
ENSMUST00000132468
Exons numbers
4-5
Ensembl exons ids
ENSMUSE00001244462;ENSMUSE00001273550
Amplicon start
537
Amplicon length
66
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000015841
Protein coding
CCDS17613
NM_001163641
Chr.3: 95323525 - 95357200
ENSMUST00000107170
Protein coding
CCDS17613
NM_018877
Chr.3: 95323525 - 95357202
ENSMUST00000107171
Protein coding
CCDS50991
NM_001163642
Chr.3: 95323525 - 95357156
ENSMUST00000124638
Retained intron
Chr.3: 95323525 - 95357155
ENSMUST00000132468
Retained intron
Chr.3: 95339145 - 95357156