Assay name​
MM_BDNF_2229733 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for Bdnf
Assay targets 11 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
Bdnf
Species​
Mus musculus
Main target​
ENSMUST00000111042
Exons numbers​
1
Ensembl exons ids​
ENSMUSE00000686454
Amplicon start​
2753
Amplicon length​
69
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000053317
Protein coding
CCDS38193
NM_007540
Chr.2: 109674700 - 109727007
ENSMUST00000111042
Protein coding
Chr.2: 109709383 - 109727007
ENSMUST00000111043
Protein coding
CCDS38194
NM_001285417
Chr.2: 109694409 - 109727007
ENSMUST00000111044
Protein coding
CCDS38194
NM_001316310;NM_001285421
Chr.2: 109694469 - 109727007
ENSMUST00000111045
Protein coding
CCDS38194
NM_001048142
Chr.2: 109693563 - 109727007
ENSMUST00000111046
Protein coding
CCDS38194
NM_001285419
Chr.2: 109677032 - 109727007
ENSMUST00000111047
Protein coding
CCDS38194
NM_001285416
Chr.2: 109675897 - 109727007
ENSMUST00000111049
Protein coding
CCDS38194
NM_001285418
Chr.2: 109675897 - 109727007
ENSMUST00000111050
Protein coding
CCDS38194
NM_001048141
Chr.2: 109692436 - 109727007
ENSMUST00000111051
Protein coding
CCDS38194
NM_001048139
Chr.2: 109675897 - 109727007
ENSMUST00000176893
Protein coding
CCDS38194
NM_001285420;NM_001285422
Chr.2: 109693027 - 109727007