Assay name
MM_CASP12_2270258 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Casp12
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Casp12
Species
Mus musculus
Main target
ENSMUST00000151788
Exons numbers
4-5
Ensembl exons ids
ENSMUSE00001297007;ENSMUSE00001290338
Amplicon start
395
Amplicon length
94
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000027009
Protein coding
CCDS22800
NM_009808
Chr.9: 5345430 - 5373032
ENSMUST00000138308
Retained intron
Chr.9: 5345496 - 5354448
ENSMUST00000149520
Retained intron
Chr.9: 5345479 - 5353445
ENSMUST00000151332
Protein coding
Chr.9: 5345504 - 5358823
ENSMUST00000151788
Nonsense mediated decay
Chr.9: 5345476 - 5372881