Assay name
MM_SLC38A1_2272393 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Slc38a1
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Slc38a1
Species
Mus musculus
Main target
ENSMUST00000088454
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00000127157;ENSMUSE00000127153
Amplicon start
291
Amplicon length
115
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000088452
Protein coding
CCDS27777
NM_001166458
Chr.15: 96571418 - 96642913
ENSMUST00000088454
Protein coding
CCDS27777
NM_001166456
Chr.15: 96571418 - 96642250
ENSMUST00000100262
Protein coding
CCDS27777
NM_134086
Chr.15: 96575987 - 96641962
ENSMUST00000230756
Retained intron
Chr.15: 96580687 - 96642212
ENSMUST00000230767
Protein coding
Chr.15: 96613702 - 96642213