Assay name
MM_PBRM1_2314820 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Pbrm1
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 15 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
Pbrm1
Species
Mus musculus
Main target
ENSMUST00000052239
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00000690445;ENSMUSE00001270990
Amplicon start
212
Amplicon length
69
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000022471
Protein coding
Chr.14: 31025510 - 31120020
ENSMUST00000022474
Protein coding
Chr.14: 31025510 - 31118947
ENSMUST00000052239
Protein coding
Chr.14: 31019208 - 31119119
ENSMUST00000090214
Protein coding
Chr.14: 31025511 - 31120041
ENSMUST00000112092
Protein coding
Chr.14: 31025510 - 31118948
ENSMUST00000112094
Protein coding
Chr.14: 31019170 - 31118967
ENSMUST00000112095
Protein coding
Chr.14: 31019138 - 31121592
ENSMUST00000112098
Protein coding
CCDS36851
NM_001081251
Chr.14: 31019138 - 31120041
ENSMUST00000112106
Protein coding
Chr.14: 31019149 - 31027530
ENSMUST00000123678
Nonsense mediated decay
Chr.14: 31025510 - 31118967
ENSMUST00000136237
Nonsense mediated decay
Chr.14: 31025507 - 31118966
ENSMUST00000144009
Protein coding
Chr.14: 31019177 - 31027498
ENSMUST00000145497
Processed transcript
Chr.14: 31019199 - 31032063
ENSMUST00000146325
Protein coding
Chr.14: 31019157 - 31082598
ENSMUST00000156628
Protein coding
Chr.14: 31025507 - 31113945