Assay name
RN_SHANK2_2407563 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Shank2
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Shank2
Species
Rattus norvegicus
Main target
ENSRNOT00000092579
Exons numbers
5-6
Ensembl exons ids
ENSRNOE00000485890;ENSRNOE00000504499
Amplicon start
600
Amplicon length
109
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSRNOT00000071484
Protein coding
Chr.1: 217151166 - 217592763
ENSRNOT00000071741
Protein coding
Chr.1: 217345545 - 217589035
ENSRNOT00000075078
Protein coding
NM_201350
Chr.1: 217173199 - 217589037
ENSRNOT00000092278
Protein coding
Chr.1: 217349493 - 217566581
ENSRNOT00000092357
Protein coding
NM_001004133
Chr.1: 217459321 - 217589488
ENSRNOT00000092386
Protein coding
NM_133440
Chr.1: 217459215 - 217592403
ENSRNOT00000092516
Protein coding
NM_133441
Chr.1: 217345154 - 217592403
ENSRNOT00000092579
Protein coding
Chr.1: 217349497 - 217577938