Assay name
RN_PHF1_2422887 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Phf1
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Phf1
Species
Rattus norvegicus
Main target
ENSRNOT00000092247
Exons numbers
10-11
Ensembl exons ids
ENSRNOE00000334598;ENSRNOE00000305977
Amplicon start
1053
Amplicon length
60
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSRNOT00000059548
Protein coding
Chr.20: 5526975 - 5531939
ENSRNOT00000091364
Protein coding
NM_212538
Chr.20: 5527181 - 5531938
ENSRNOT00000092247
Nonsense mediated decay
Chr.20: 5526961 - 5531940
ENSRNOT00000092650
Retained intron
Chr.20: 5526998 - 5531938
ENSRNOT00000092667
Retained intron
Chr.20: 5526999 - 5531941
ENSRNOT00000092668
Retained intron
Chr.20: 5526979 - 5531939