Assay name
HS_SYNGAP1_143170 QuantiNova LNA Probe PCR Assay
Assay specification
Best coverage assay for SYNGAP1
Assay targets 11 transcripts
Assay spans exon
Assay targets 11 transcripts
Assay spans exon
Gene symbol
SYNGAP1
Gene aliases
SYNGAP;RASA5;KIAA1938
Species
Homo sapiens
Main target
ENST00000479510
Exons numbers
5-6
Ensembl exons ids
ENSE00003636443;ENSE00003473740
Amplicon start
650
Amplicon length
96
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000293748
Nonsense mediated decay
Chr.6: 33420310 - 33452395
ENST00000418600
Protein coding
Chr.6: 33420265 - 33453689
ENST00000428982
Protein coding
Chr.6: 33431731 - 33452210
ENST00000449372
Protein coding
NM_001130066
Chr.6: 33420255 - 33451842
ENST00000479510
Retained intron
Chr.6: 33420070 - 33439121
ENST00000628646
Protein coding
Chr.6: 33420265 - 33449167
ENST00000629380
Protein coding
CCDS34434
Chr.6: 33420070 - 33457541
ENST00000638142
Nonsense mediated decay
Chr.6: 33419909 - 33441759
ENST00000644458
Protein coding
Chr.6: 33420201 - 33451862
ENST00000645250
Protein coding
Chr.6: 33431911 - 33452092
ENST00000646630
Protein coding
CCDS34434
NM_006772
Chr.6: 33420065 - 33453689