Assay name​
HS_SYNGAP1_143170 QuantiNova LNA Probe PCR Assay
Assay specification​
Best coverage assay for SYNGAP1
Assay targets 11 transcripts
Assay spans exon
Assay targets 11 transcripts
Assay spans exon
Gene symbol​
SYNGAP1
Gene aliases​
SYNGAP;RASA5;KIAA1938
Species​
Homo sapiens
Main target​
ENST00000479510
Exons numbers​
5-6
Ensembl exons ids​
ENSE00003636443;ENSE00003473740
Amplicon start​
650
Amplicon length​
96
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000293748
Nonsense mediated decay
Chr.6: 33420310 - 33452395
ENST00000418600
Protein coding
Chr.6: 33420265 - 33453689
ENST00000428982
Protein coding
Chr.6: 33431731 - 33452210
ENST00000449372
Protein coding
NM_001130066
Chr.6: 33420255 - 33451842
ENST00000479510
Retained intron
Chr.6: 33420070 - 33439121
ENST00000628646
Protein coding
Chr.6: 33420265 - 33449167
ENST00000629380
Protein coding
CCDS34434
Chr.6: 33420070 - 33457541
ENST00000638142
Nonsense mediated decay
Chr.6: 33419909 - 33441759
ENST00000644458
Protein coding
Chr.6: 33420201 - 33451862
ENST00000645250
Protein coding
Chr.6: 33431911 - 33452092
ENST00000646630
Protein coding
CCDS34434
NM_006772
Chr.6: 33420065 - 33453689