Assay name​
HS_SYNGAP1_648315 QuantiNova LNA Probe PCR Assay
Assay specification​
Best coverage assay for SYNGAP1
Assay targets 5 transcripts
Assay spans exon
Assay targets 5 transcripts
Assay spans exon
Gene symbol​
SYNGAP1
Species​
Homo sapiens
Main target​
ENST00000481000
Exons numbers​
1-2
Ensembl exons ids​
ENSE00001818035;ENSE00001825502
Amplicon start​
49
Amplicon length​
106
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000395071
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 33560455 - 33592583
ENST00000414753
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 33571921 - 33592398
ENST00000455687
Protein coding
NM_001130066;NM_006772
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 33560354 - 33593877
ENST00000481000
Retained intron
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 33586899 - 33588348
ENST00000484671
Processed transcript
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 33586852 - 33589241