Assay name​
MM_SYNGAP1_820837 QuantiNova LNA Probe PCR Assay
Assay specification​
Best coverage assay for Syngap1
Assay targets 12 transcripts
Assay spans exon
Assay targets 12 transcripts
Assay spans exon
Gene symbol​
Syngap1
Species​
Mus musculus
Main target​
ENSMUST00000202049
Exons numbers​
1-2
Ensembl exons ids​
ENSMUSE00001363864;ENSMUSE00000518785
Amplicon start​
20
Amplicon length​
108
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000081285
Protein coding
Chr.17: 26952138 - 26970933
ENSMUST00000177932
Protein coding
Chr.17: 26941452 - 26970541
ENSMUST00000193200
Nonsense mediated decay
Chr.17: 26941499 - 26971121
ENSMUST00000194598
Protein coding
CCDS59625
NM_001281491
Chr.17: 26941253 - 26972434
ENSMUST00000201186
Nonsense mediated decay
Chr.17: 26962306 - 26970562
ENSMUST00000201349
Protein coding
Chr.17: 26941453 - 26970668
ENSMUST00000201702
Protein coding
Chr.17: 26941442 - 26970581
ENSMUST00000202049
Nonsense mediated decay
Chr.17: 26963012 - 26970591
ENSMUST00000202208
Nonsense mediated decay
Chr.17: 26963026 - 26970587
ENSMUST00000228963
Protein coding
Chr.17: 26952319 - 26970933
ENSMUST00000229490
Protein coding
Chr.17: 26941382 - 26970601
ENSMUST00000231853
Protein coding
Chr.17: 26952886 - 26971121