SLC12A1 Gene Summary [Human]

This gene encodes a kidney-specific sodium-potassium-chloride cotransporter that is expressed on the luminal membrane of renal epithelial cells of the thick ascending limb of Henle's loop and the macula densa. It plays a key role in concentrating urine and accounts for most of the NaCl resorption. It is sensitive to such diuretics as furosemide and bumetanide. Some Bartter-like syndromes result from defects in this gene. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Additional splice variants have been described but their biological validity in humans has not been experimentally proven.[provided by RefSeq, May 2010]

Details

Type
Protein Coding
Official Symbol
SLC12A1
Official Name
solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]
Ensembl ID
ENSG00000074803
Bio databases IDs NCBI: 6557 Ensembl: ENSG00000074803
Aliases solute carrier family 12 member 1
Synonyms AI788571, BSC, BSC-1, CCC2, D630042G03Rik, mBSC1, mNKCC2, Na+/k+/2cl- symporter, NKCC2, solute carrier family 12 member 1, solute carrier family 12, member 1, urehr3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SLC12A1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • sodium:chloride/potassium:chloride symporter
  • Amino acid permease N-terminal
  • amino acid permease
  • protein binding
  • transporter
  • Solute carrier family 12
  • K-Cl cotransporter

Pathways

Biological processes and signaling networks where the SLC12A1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • miR-21-5p (and other miRNAs w/seed AGCUUAU)
  • ENaC
  • OS9
  • chlorthalidone
  • ethacrynic acid
  • furosemide
  • bumetanide
  • torsemide
  • quinethazone
  • methyclothiazide
disease
  • infection
  • hypertension
  • Bartter syndrome type 1
  • kidney disease
  • edema
  • heart failure
  • autism
  • vascular disease
  • chronic kidney disease
  • essential hypertension
regulated by
  • heavy metal
  • TNF
  • GCG
  • lipopolysaccharide
  • IL1B
  • olanzapine
  • LHX1
  • N-acetyl-L-cysteine
  • cyclosporin A
  • KLHL3
regulates
  • Ca2+
  • creatinine
  • D-glucose
  • renin
  • rubidium
  • inorganic salt
  • ammonium
  • MUP
  • bicarbonate
  • Na+
role in cell
  • downregulation in
  • recruitment

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell surface
  • cellular membrane
  • apical cell surfaces
  • apical membrane
  • exosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SLC12A1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • ion transport
  • potassium ion homeostasis
  • chloride ion homeostasis
  • ion transmembrane transport
  • sodium ion homeostasis
  • sodium ion transmembrane transport
  • cell volume homeostasis

Cellular Component

Where in the cell the gene product is active
  • extracellular vesicular exosome
  • membrane
  • apical plasma membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • sodium:potassium:chloride symporter activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.