BPTF Gene Summary [Human]

This gene was identified by the reactivity of its encoded protein to a monoclonal antibody prepared against brain homogenates from patients with Alzheimer's disease. Analysis of the original protein (fetal Alz-50 reactive clone 1, or FAC1), identified as an 810 aa protein containing a DNA-binding domain and a zinc finger motif, suggested it might play a role in the regulation of transcription. High levels of FAC1 were detected in fetal brain and in patients with neurodegenerative diseases. The protein encoded by this gene is actually much larger than originally thought, and it also contains a C-terminal bromodomain characteristic of proteins that regulate transcription during proliferation. The encoded protein is highly similar to the largest subunit of the Drosophila NURF (nucleosome remodeling factor) complex. In Drosophila, the NURF complex, which catalyzes nucleosome sliding on DNA and interacts with sequence-specific transcription factors, is necessary for the chromatin remodeling required for transcription. Two alternative transcripts encoding different isoforms have been described completely. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
BPTF
Official Name
bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
Ensembl ID
ENSG00000171634
Bio databases IDs NCBI: 2186 Ensembl: ENSG00000171634
Aliases bromodomain PHD finger transcription factor
Synonyms 9430093H17Rik, bromodomain PHD finger transcription factor, circBPTF, circRNA-BPTF, FAC1, FALZ, NEDDFL, NURF301
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human BPTF often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • PHD zinc finger
  • transcription regulator
  • nuclear export signal
  • nuclear localization sequence
  • DDT domain
  • transcription factor binding
  • protein binding
  • DNA dependent ATPase
  • Bromodomain
  • sequence-specific DNA binding
  • acidic domain
  • PEST domain
  • Williams-Beuren syndrome DDT (WSD), D-TOX E motif
  • PHD finger superfamily
  • N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
  • basic domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cancer
  • major depression
  • endometrial carcinoma
  • insomnia
  • anxiety disorder
  • neurodevelopmental disorder
  • COVID-19
  • hereditary disorder
  • rheumatoid arthritis
  • post-traumatic stress disorder
regulated by
regulates
  • synthetic promoter
  • AKT
  • DNA promoter
  • DNA endogenous promoter
  • luciferase reporter gene
  • EN2
  • EN1
  • RNA polymerase II
role in cell
  • proliferation
  • migration
  • outgrowth
  • remodeling

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • perinuclear region
  • nucleoplasm
  • chromatin
  • perikaryon
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human BPTF gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • chromatin remodeling
  • endoderm development
  • anterior/posterior pattern specification
  • regulation of transcription, DNA-dependent
  • brain development
  • positive regulation of transcription from RNA polymerase II promoter
  • embryonic placenta development
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • dendrite
  • nucleus
  • perinuclear region of cytoplasm
  • extracellular vesicular exosome
  • cytoplasm
  • cell body
  • chromatin
  • NURF complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA-dependent ATPase activity
  • protein binding
  • metal ion binding
  • methylated histone residue binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • sequence-specific DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.