FENDRR Gene Summary [Human]

This gene produces a spliced long non-coding RNA transcribed bidirectionally with FOXF1 on the opposite strand. A similar gene in mouse is essential for normal development of the heart and body wall. The encoded transcript is thought to act by binding to polycomb repressive complex 2 (PRC2) and/or TrxG/MLL complexes to promote the methylation of the promoters of target genes, thus reducing their expression. It has been suggested that this transcript may play a role in the progression of gastric cancer. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Mar 2015]

Details

Type
Long Non-Coding RNA
Official Symbol
FENDRR
Official Name
FOXF1 adjacent non-coding developmental regulatory RNA [Source:HGNC Symbol;Acc:HGNC:43894]
Ensembl ID
ENSG00000268388
Bio databases IDs NCBI: 400550 Ensembl: ENSG00000268388
Aliases FOXF1 adjacent non-coding developmental regulatory RNA
Synonyms 1110050K14Rik, FOXF1 adjacent non-coding developmental regulatory RNA, FOXF1-AS1, lincFOXF1, linc-Foxf1a, LL66, LOC283904, LOC400550, onco-lncRNA-21, TCONS 00024240
Species
Human, Homo sapiens
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human FENDRR often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • double-stranded DNA binding
  • nucleic acid binding
  • sequence-specific DNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • gastric cancer
  • lung adenocarcinoma formation
  • open-angle glaucoma
  • colorectal cancer
  • Barrett syndrome
  • pulmonary hypertension
  • omphalocele
  • obesity
  • lung squamous cell carcinoma
  • squamous cell lung cancer
regulated by
role in cell
  • expression in
  • number
  • phosphorylation in
  • migration
  • invasion by
  • formation by
  • organization
  • ubiquitination in
  • epithelial-mesenchymal transition in
  • methylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Unknown

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.