RT1-N3 Gene Summary [Rat]

Predicted to enable peptide antigen binding activity and signaling receptor binding activity. Predicted to be involved in several processes, including antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent; antigen processing and presentation of endogenous peptide antigen via MHC class Ib; and positive regulation of T cell mediated cytotoxicity. Predicted to be active in external side of plasma membrane and extracellular space. [provided by Alliance of Genome Resources, Apr 2025]

Details

Type
Protein Coding
Official Symbol
RT1-N3
Official Name
RT1 class Ib, locus N3 [Source:RGD Symbol;Acc:1598370]
Ensembl ID
ENSRNOG00000000795
Bio databases IDs NCBI: 24750 Ensembl: ENSRNOG00000000795
Aliases RT1 class Ib, locus N3
Synonyms 27b, H2-T17, H2-T9, histocompatibility 2, T region locus 22, LOC100505163, RT1 class Ib, locus N2, RT1 class Ib, locus N3, RT1-N2, RT1-N3, T22b
Species
Rat, Rattus norvegicus
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Rt1-N3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • TAP2 binding
  • Immunoglobulin C1-set domain
  • MHC class I protein binding
  • TAP binding
  • TAP1 binding
  • immunoglobulin domain
  • T-cell receptor binding
  • protein binding
  • receptor binding
  • identical protein binding
  • beta-2-microglobulin binding
  • Class I Histocompatibility antigen, domains alpha 1 and 2
  • natural killer cell lectin-like receptor binding
  • CD8 receptor binding
  • protein homodimerization
  • chaperone binding
  • peptide antigen binding

Pathways

Biological processes and signaling networks where the Rt1-N3 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • TCR (complex)
  • H2-T22
  • TCR gamma delta
  • CD8A
regulated by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell surface
  • cellular membrane
  • Golgi Apparatus
  • Endoplasmic Reticulum
  • Golgi membrane
  • lysosome membrane
  • endosomal membrane
  • early endosomes

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.