Atp6v1f Gene Summary [Rat]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is the V1 domain F subunit protein. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
Atp6v1f
Official Name
ATPase H+ transporting V1 subunit F [Source:RGD Symbol;Acc:621552]
Ensembl ID
ENSRNOG00000007392
Bio databases IDs NCBI: 116664 Ensembl: ENSRNOG00000007392
Aliases ATPase H+ transporting V1 subunit F
Synonyms 1110004G16Rik, ATP6S14, ATPase, H+ transporting, lysosomal V1 subunit F, ATPase H+ transporting V1 subunit F, Vacuolar ATPase Subunit 1F, Vacuolar ATP Synthase Subunit F, VATF, V-ATPase V1-F, Vma7
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Atp6v1f often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATP synthase (F/14-kDa) subunit
  • H+-transporting two-sector ATPase
  • enzyme
  • protein binding
  • PRK03957

Pathways

Biological processes and signaling networks where the Atp6v1f gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colorectal adenoma
  • colorectal adenoma formation
  • Alzheimer disease
regulated by
regulates
role in cell
  • morphology
  • Clathrin mediated endocytosis by
  • acidification in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • detergent resistant lipid raft fraction
  • cellular membrane
  • cytosol

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Atp6v1f gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • intracellular pH reduction
  • endosomal lumen acidification
  • lysosomal lumen acidification
  • vacuolar acidification

Cellular Component

Where in the cell the gene product is active
  • proton-transporting V-type ATPase complex
  • Golgi membrane
  • plasma membrane
  • lysosomal membrane
  • vacuolar proton-transporting V-type ATPase, V1 domain
  • extracellular vesicular exosome
  • membrane
  • vacuolar proton-transporting V-type ATPase complex
  • cytosol
  • endosome membrane
  • synaptic vesicle membrane
  • clathrin coated vesicle membrane

Molecular Function

What the gene product does at the molecular level
  • ATPase activity, coupled to transmembrane movement of ions
  • protein binding
  • hydrogen ion transmembrane transporter activity
  • proton-transporting ATPase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.