Snrnp25 Gene Summary [Rat]

Two types of spliceosomes catalyze splicing of pre-mRNAs. The major U2-type spliceosome is found in all eukaryotes and removes U2-type introns, which represent more than 99% of pre-mRNA introns. The minor U12-type spliceosome is found in some eukaryotes and removes U12-type introns, which are rare and have distinct splice consensus signals. The U12-type spliceosome consists of several small nuclear RNAs and associated proteins. This gene encodes a 25K protein that is a component of the U12-type spliceosome. [provided by RefSeq, Apr 2010]

Details

Type
Protein Coding
Official Symbol
Snrnp25
Official Name
small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:RGD Symbol;Acc:1310922]
Ensembl ID
ENSRNOG00000020626
Bio databases IDs NCBI: 287170 Ensembl: ENSRNOG00000020626
Aliases small nuclear ribonucleoprotein U11/U12 subunit 25
Synonyms 3300001G02Rik, C16ORF33, RGD1310922, small nuclear ribonucleoprotein 25 (U11/U12), small nuclear ribonucleoprotein U11/U12 subunit 25
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Snrnp25 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ubl1_cv_Nsp3_N-like
  • protein binding
  • ubiquitin-like domain

Pathways

Biological processes and signaling networks where the Snrnp25 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colon carcinoma
  • colon epithelial cancer
  • metabolic syndrome X
  • pancreatic epithelial cancer
  • pancreatic carcinoma
  • cervical cancer
regulated by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cytoplasmic bridges
  • cytosol
  • spliceosomes
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Snrnp25 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • RNA splicing
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • U12-type spliceosomal complex
  • nucleus
  • intercellular bridge
  • cytosol
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.