Atp5mf Gene Summary [Rat]

Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. It is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, which comprises the proton channel. The catalytic portion of mitochondrial ATP synthase consists of five different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and single representatives of the gamma, delta, and epsilon subunits. The proton channel likely has nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene encodes the f subunit of the Fo complex. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene. This gene has multiple pseudogenes. Naturally occurring read-through transcription also exists between this gene and the downstream pentatricopeptide repeat domain 1 (PTCD1) gene. [provided by RefSeq, Nov 2010]

Details

Type
Protein Coding
Official Symbol
Atp5mf
Official Name
ATP synthase membrane subunit f [Source:RGD Symbol;Acc:1596067]
Ensembl ID
ENSRNOG00000027049
Bio databases IDs NCBI: 690441 Ensembl: ENSRNOG00000027049
Aliases ATP synthase membrane subunit f
Synonyms 1110019H14Rik, ATP5J2, ATP5JL, ATPK, ATP synthase membrane subunit f, LOC684567
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Atp5mf often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • adenosine-tetraphosphatase
  • hydrogen-transporting ATP synthase activity, rotational mechanism
  • transporter

Pathways

Biological processes and signaling networks where the Atp5mf gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • breast cancer
  • Huntington disease
  • chromophobe renal cell carcinoma
  • chromophobe renal cancer
  • infection by Influenza A virus subtype H1N1
regulated by
regulates
  • H+
role in cell
  • autophagy
  • autophagy in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • pH resistant lipid raft fraction
  • detergent resistant lipid raft fraction
  • Mitochondria
  • mitochondrial inner membrane
  • nuclear envelope

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Atp5mf gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • mitochondrial ATP synthesis coupled proton transport
  • ATP synthesis coupled proton transport

Cellular Component

Where in the cell the gene product is active
  • nuclear membrane
  • proton-transporting ATP synthase complex, coupling factor F(o)
  • mitochondrion
  • mitochondrial inner membrane
  • mitochondrial proton-transporting ATP synthase complex

Molecular Function

What the gene product does at the molecular level
  • hydrogen ion transporting ATP synthase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.